Search results for "Cytochromes b"

showing 10 items of 19 documents

SDS-facilitated in vitro formation of a transmembrane B-type cytochrome is mediated by changes in local pH.

2011

Abstract The folding and stabilization of α-helical transmembrane proteins are still not well understood. Following cofactor binding to a membrane protein provides a convenient method to monitor the formation of appropriate native structures. We have analyzed the assembly and stability of the transmembrane cytochrome b 559 ′, which can be efficiently assembled in vitro from a heme-binding PsbF homo-dimer by combining free heme with the apo-cytochrome b 559 ′. Unfolding of the protein dissolved in the mild detergent dodecyl maltoside may be induced by addition of SDS, which at high concentrations leads to dimer dissociation. Surprisingly, absorption spectroscopy reveals that heme binding and…

Models MolecularCofactor bindingProtein FoldingHeme bindingCytochromebiologyChemistryCytochrome bSpectrum AnalysisMembrane ProteinsSodium Dodecyl SulfateHemeCytochromes bHydrogen-Ion ConcentrationTransmembrane proteinchemistry.chemical_compoundBiochemistryStructural Biologybiology.proteinHumansProtein foldingMolecular BiologyHemeHistidineProtein BindingJournal of molecular biology
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The levels of quinone reductases, superoxide dismutase and glutathione-related enzymatic activities in diethylstilbestrol-induced carcinogenesis in t…

1990

The level of quinone oxidoreductases (microsomal and cytosolic DT-diaphorase, NADPH-cytochrome P450 reductase and NADH-cytochrome b5 reductase), superoxide dismutase and glutathione-related enzymatic activities in diethylstilbestrol (DES)-induced carcinogenesis in kidney from Syrian golden hamsters are presented. Animals that exhibited two different stages of DES-induced carcinogenesis in kidney--pre- and neoplastic lesions and tumorous lesions (after 6 and 8 months of continuous exposure to DES respectively)--were studied in comparison to kidneys from control animals. A dramatic decrease in microsomal and cytosolic DT-diaphorase activities (13.6 and 37.8% of controls), as well as in glutat…

MaleCancer Researchmedicine.medical_specialtyReductaseKidneySuperoxide dismutaseLipid peroxidationchemistry.chemical_compoundQuinone ReductasesCytosolReference ValuesInternal medicineCricetinaeMicrosomesmedicineAnimalsQuinone ReductasesDiethylstilbestrolGlutathione TransferaseNADPH-Ferrihemoprotein Reductasechemistry.chemical_classificationGlutathione PeroxidasebiologyMesocricetusSuperoxideSuperoxide DismutaseGlutathione peroxidaseGeneral MedicineGlutathioneKidney NeoplasmsEndocrinologyCytochromes b5chemistrybiology.proteinPrecancerous ConditionsGolden hamsterCarcinogenesis
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Influence of gallic acid esters on drug-metabolizing enzymes of rat liver

1982

The effect of three antioxidants, propyl, octyl and dodecyl gallate, on hepatic drug metabolism in male rats was studied in vivo and in vitro. When fed at a dietary concentration of 1% for 14 days, only dodecyl gallate increased relative liver weight. Cytochrome P-450 content was not influenced, but a slight increase in cytochrome b5 content was observed after the feeding of propyl gallate. Monooxygenase activity (benzo[a]pyrene-hydroxylase and ethoxycoumarin-deethylase activities) was not affected by propyl or octyl gallate, but a significant decrease in benzo[a]pyrene-hydroxylase activity was apparent in rats fed dodecyl gallate. Study of benzo[a]pyrene-metabolite formation in liver micro…

MaleMetabolitePharmacologyToxicologyAntioxidantsMixed Function Oxygenaseschemistry.chemical_compoundCytochrome P-450 Enzyme SystemGallic Acidpolycyclic compoundsAnimalsGallic acidBenzopyrene HydroxylasePropyl gallateEstersRats Inbred StrainsDodecyl gallateGeneral MedicineGallateCytochrome b GroupDietRatsCytochromes b5chemistryBiochemistryEnzyme InductionMicrosomes LiverMicrosomeOctyl gallateDrug metabolismFood ScienceFood and Chemical Toxicology
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Molecular and ecological signs of mitochondrial adaptation: consequences for introgression?

2013

The evolution of the mitochondrial genome and its potential adaptive impact still generates vital debates. Even if mitochondria have a crucial functional role, as they are the main cellular energy suppliers, mitochondrial DNA (mtDNA) introgression is common in nature, introducing variation in populations upon which selection may act. Here we evaluated whether the evolution of mtDNA in a rodent species affected by mtDNA introgression is explained by neutral expectations alone. Variation in one mitochondrial and six nuclear markers in Myodes glareolus voles was examined, including populations that show mtDNA introgression from its close relative, Myodes rutilus. In addition, we modelled prote…

MaleMitochondrial DNANuclear geneMolecular Sequence DataIntrogressionMitochondrionDNA MitochondrialEvolution MolecularGeneticsAnimalsSelection GeneticEcosystemPhylogenyGenetics (clinical)Local adaptationGeneticsNatural selectionbiologyArvicolinaeEcologyCytochrome bta1182Genetic VariationCytochromes bbiology.organism_classificationAdaptation PhysiologicalMitochondriata1181Original ArticleRutilusHeredity
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Mitochondrial Fatty Acid β-Oxidation Inhibition Promotes Glucose Utilization and Protein Deposition through Energy Homeostasis Remodeling in Fish.

2020

BACKGROUND: Fish cannot use carbohydrate efficiently and instead utilize protein for energy supply, thus limiting dietary protein storage. Protein deposition is dependent on protein turnover balance, which correlates tightly with cellular energy homeostasis. Mitochondrial fatty acid β-oxidation (FAO) plays a crucial role in energy metabolism. However, the effect of remodeled energy homeostasis caused by inhibited mitochondrial FAO on protein deposition in fish has not been intensively studied. OBJECTIVES: This study aimed to identify the regulatory role of mitochondrial FAO in energy homeostasis maintenance and protein deposition by studying lipid, glucose, and protein metabolism in fish. M…

0301 basic medicineMaleProtein metabolismMedicine (miscellaneous)MitochondrionEnergy homeostasis03 medical and health scienceschemistry.chemical_compoundNile tilapia0302 clinical medicineAdjuvants ImmunologicmedicineAnimalsHomeostasisInsulinCarnitineProtein kinase ACells CulturedZebrafishNutrition and DieteticsbiologyCarnitine O-PalmitoyltransferaseChemistryFatty AcidsProtein turnoverProteinsMetabolismCichlidsDNACytochromes bbiology.organism_classificationMitochondria030104 developmental biologyGlucoseBiochemistryMutationHepatocytesNutrient Physiology Metabolism and Nutrient-Nutrient InteractionsEnergy MetabolismOxidation-Reduction030217 neurology & neurosurgerymedicine.drugMethylhydrazinesThe Journal of nutrition
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Fossorial but widespread: the phylogeography of the common spadefoot toad (Pelobates fuscus), and the role of the Po Valley as a major source of gene…

2007

International audience; Pelobates fuscus is a fossorial amphibian that inhabits much of the European plain areas. To unveil traces of expansion and contraction events of the species' range, we sequenced 702 bp of the mitochondrial cytochrome b gene. To infer the population history we applied phylogeographical methods, such as nested clade phylogeographical analysis (NCPA), and used summary statistics to analyse population structure under a neutral model of evolution. Populations were assigned to different drainage systems and we tested hypotheses of explicit refugial models using information from analysis of molecular variance, nucleotide diversity, effective population size estimation, NCP…

0106 biological scienceshaplotypesPelobates fuscuspopulation-structuremismatch distribution01 natural sciencesNucleotide diversityCoalescent theorypostglacial range expansionEffective population sizePhylogeny[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health scienceseducation.field_of_studybiologyGeographyEcologyFossilssummarycoalescentCytochromes bEuropeMitochondrial-dnastatisticsAnuracladistic-analysisPopulationPelobates[SDV.BID]Life Sciences [q-bio]/Biodiversitynucleotide diversity010603 evolutionary biology03 medical and health sciencesstatistical phylogeographygeographical-distributionGeneticsVicarianceAnimalseducationEcology Evolution Behavior and Systematics030304 developmental biologyPopulation DensityinferenceDNA15. Life on landbiology.organism_classificationPhylogeographyspeciationEvolutionary biologyphylogeographical analysis[SDE.BE]Environmental Sciences/Biodiversity and EcologydivergencePelobates cultripesMolecular ecology
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Fe- but not Mg-protophorphyrin IX binds to a transmembrane b-type cytochrome.

2013

Transmembrane b-type cytochromes, which are crucially involved in electron transfer chains, bind one or more heme (Fe-protoporphyrin IX) molecules non-covalently. Similarly, chlorophylls are typically also non-covalently bound by several membrane integral polypeptides involved in photosynthesis. While both, chlorophyll and heme, are tetrapyrrole macrocycles, they have different substituents at the tetrapyrrole ring moiety. Furthermore, the central metal ion is Mg(2+) in chlorophyll and Fe(2+/3+) in heme. As heme and chlorophyll a have similar structures and might both be ligated by two histidine residues of a polypeptide chain, and as the local concentration of chlorophyll a might be up to …

Models MolecularChlorophyll aCytochromebiologyChemistryStereochemistryIronProtoporphyrinsCell BiologyHemeCytochromes bPhotochemistryTetrapyrroleElectron transferchemistry.chemical_compoundChlorophyllbiology.proteinMoietyMagnesiumMolecular BiologyHemeHistidineMolecular membrane biology
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Cytochrome b sequences of ancient cattle and wild ox support phylogenetic complexity in the ancient and modern bovine populations.

2009

Mitochondrial DNA has been the traditional marker for the study of animal domestication, as its high mutation rate allows for the accumulation of molecular diversity within the time frame of domestic history. Additionally, it is exclusively maternally inherited and haplotypes become part of the domestic gene pool via actual capture of a female animal rather than by interbreeding with wild populations. Initial studies of British aurochs identified a haplogroup, designated P, which was found to be highly divergent from all known domestic haplotypes over the most variable portion of the D-loop. Additional analysis of a large and geographically representative sample of aurochs from northern and…

Haplogroup L4aSlovakiaPopulationMolecular Sequence DataHaplogroupEvolution MolecularGermanyGeneticsAnimalsCluster AnalysiseducationDomesticationPhylogenyGeneticseducation.field_of_studybiologyBase SequenceCytochrome bFossilsHaplotypeGeneral MedicineSequence Analysis DNAAurochsCytochromes bbiology.organism_classificationhumanitiesUnited KingdomAncient DNAEvolutionary biologyAnimal Science and ZoologyCattleAnimal genetics
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The soluble loop BC region guides, but not dictates, the assembly of the transmembrane cytochrome b6

2017

Studying folding and assembly of naturally occurring α-helical transmembrane proteins can inspire the design of membrane proteins with defined functions. Thus far, most studies have focused on the role of membrane-integrated protein regions. However, to fully understand folding pathways and stabilization of α–helical membrane proteins, it is vital to also include the role of soluble loops. We have analyzed the impact of interhelical loops on folding, assembly and stability of the heme-containing four-helix bundle transmembrane protein cytochrome b6 that is involved in charge transfer across biomembranes. Cytochrome b6 consists of two transmembrane helical hairpins that sandwich two heme mol…

Metabolic ProcessesProtein FoldingProtein StructureSurfactantsCell MembranesMaterials ScienceDetergentslcsh:MedicineHemeBiochemistrySpinacia oleraceaddc:570Macromolecular Structure AnalysisRNA stem-loop structure500 Natural sciences and mathematicsAmino Acid SequencePost-Translational ModificationEnzyme ChemistryRNA structurelcsh:ScienceMolecular BiologyMaterials by Attributelcsh:RMembrane ProteinsBiology and Life SciencesProteinsProteasesCell BiologyEnzymesNucleic acidsMetabolismCytochromes b6ProteolysisPhysical SciencesMutagenesis Site-DirectedEnzymologyCofactors (Biochemistry)RNAlcsh:Q500 NaturwissenschaftenCellular Structures and OrganellesDimerizationResearch Article
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Molecular phylogeny of the extinct cave lion Panthera leo spelaea.

2004

To reconstruct the phylogenetic position of the extinct cave lion (Panthera leo spelaea), we sequenced 1 kb of the mitochondrial cytochrome b gene from two Pleistocene cave lion DNA samples (47 and 32 ky B.P.). Phylogenetic analysis shows that the ancient sequences form a clade that is most closely related to the extant lions from Africa and Asia; at the same time, cave lions appear to be highly distinct from their living relatives. Our data show that these cave lion sequences represent lineages that were isolated from lions in Africa and Asia since their dispersal over Europe about 600 ky B.P., as they are not found among our sample of extant populations. The cave lion lineages presented h…

LionsTime FactorsPleistoceneZoologyBiologyEvolution MolecularCavePhylogeneticsGeneticsAnimalsCloning MolecularCladeMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyPanthera leo spelaeaDNA Primersgeographygeography.geographical_feature_categoryPhylogenetic treeCytochrome bFossilssocial sciencesDNASequence Analysis DNACytochromes bbiology.organism_classificationmusculoskeletal systemhumanitiesMolecular phylogeneticsMolecular phylogenetics and evolution
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